Developing a multi-GPU version of Eagle
* looking at distributing GPU-Eagle within singularity.

Eagle 2.4 uploaded to CRAN.
* Fixed bug in plotting function in OpenGUI
* Improved look of PlotAM
* Added interactive option to PlotAM to give users the option of saving the plot to file.

Eagle 2.3 uploaded to CRAN.
* Changed gamma parameter in AM function to lambda parameter to be consistent with extBIC parameterisation.
* Added plot function PlotAM. This capability was in the GUI but not as a function.
* Added extra table of summary information to SummaryAM function.
* Fixed bug in plotting function in GUI.

Eagle 2.2 uploaded to CRAN.
* Ability to read vcf files added to ReadMarker function
* Revised SummaryAM to also calculate and report allelic effect sizes
* Significant (order of magnitude) improvement in speed to FPR4AM (used for calculating optimal gamma parameter for model building process)
* Changed home screen in OpenGUI app because Eagel workflow has changed.
* Added Bioinformatics citation for Eagle package

Eagle 2.1.1 hosted on CRAN.
* Fixed bug introduced by last change that would cause ReadMap function to crash.

Eagle 2.1.0 hosted on CRAN.
* Continued improvement of handling of missing data.
* Better handling of errors in OpenGUI. Previously, app would crash if a file input error was encountered.

Eagle 2.0.0 hosted on CRAN.
* This is the first of several planned performance improvements. With this version, users should see at least a 50% increase in speed.

Eagle 1.5.2 hosted on CRAN.
* Minor change to noalias feature in cpp code.

Eagle 1.5.1 hosted on CRAN.
* Minor change to GUI. Attempting to make GUI more robust.
* Cleaned up shiny app.R by removing library calls
* Havent been able to solve the mysterious uv_write errors that are written to the R consul when GUI is run. The errors are intermittent and random but have no effect on performance or the analysis.

Eagle 1.5.0 hosted on CRAN.
* Significant change made to GUI - a plotting page has been add. Users can now examine the change in score statistic (used for identifying the next "best" SNP to enter the model), across a chromosome or genome. This can be done for each step of the model building process.

Eagle 1.4.0 hosted on CRAN.
* Modified SummaryAM function to work with Z matrix.
* Minor changes made to Findings page of GUI.

Eagle 1.3.0 hosted on CRAN.
* Fixed missing data issue with FPR4AM where it would crash if the trait contained missing data.
* Added capacity to ReadPheno to accommodate additional read.table arguments such as skip.

Eagle 1.2.0 hosted on CRAN.
* Modified FPR4AM so that it will give the best gamma value for a user-defined false positive rate, trait, and analysis model.
* Further developed online R documentation for AM function.

Eagle Demo site went live, giving users an opportunity to trial the Eagle GUI on some test data.

Eagle 1.1.0 hosted on CRAN.
* fixed memory bug on windows systems.
* added Z matrix functionality to accommodate data where an individual, for a trait, may have multiple measurements.
* replaced problematic tk_choose.files with shinyFiles for improved file browsing.
* changed Makefiles so that Eigen is now row major, doubling the speed.
* added new function FPR4AM to calculate, empirically, the false positive rate (FPR) for a given gamma value for extBIC.

Eagle 1.0.3 hosted on CRAN